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ESMCRunner

ferritin_plms::esmc::pretrained

Struct ESMCRunner 

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pub struct ESMCRunner { /* private fields */ }
Expand description

Wraps a loaded ESMC model for sequence embedding inference.

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impl ESMCRunner

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pub fn from_pretrained(model: ESMCModels, device: Device) -> Result<Self>

Download weights from HuggingFace and load the model.

Handles the ESMCForMaskedLM wrapper prefix (esmc.) transparently: probes for esmc.embed.weight in the safetensors and sets the VarBuilder root to vb.pp("esmc") when found, otherwise uses the flat (unwrapped) layout.

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pub fn embed_sequence(&self, sequence: &str) -> Result<Tensor>

Tokenize sequence and run a forward pass.

Returns per-residue embeddings with shape (1, L, d_model) where L includes the BOS and EOS tokens added by the tokenizer.

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impl PlmRunner for ESMCRunner

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fn embed(&self, sequence: &str) -> Result<Tensor>

Delegate to embed_sequence, returning per-residue embeddings (1, L, d_model).

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fn model_name(&self) -> &str

Model name / identifier string (e.g. “esm2”, “amplify”, “esmc”).

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